Insertion junction: CLIP2.000641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000641
Chromosome:chromosome 6
Location:7407254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300250 TTL10 (1 of 1) K16600 - tubulin polyglutamylase TTLL2 [EC:6.-.-.-] (TTLL2); Putative tubulin tyrosine ligase outside_mRNA
Cre06.g300300 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTTGATATTTCGGCACGGACCTTATAATCCCGCAGCATCTAGCCGT
Internal bar code:GGTAGATTGAACTACTTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACTCTACCCTCCCGAC
Suggested primer 2:CGTGGAAAACAGCGGACTTG