Insertion junction: CLIP2.000659_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000659
Chromosome:chromosome 2
Location:444480
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g076000 LAT3,STK1,STPK1,SNRK2K (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2; Latrunculin-B sensitive 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGTCCCCTTGAGGTCCCCCGCCTTGAACTTGAACTGGACGTTCGGGT
Internal bar code:GAATACTGGTCAGTTTCGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAACGCAGGCTTAGGAC
Suggested primer 2:CCCTTTGATAACCCACCCCC