Insertion junction: CLIP2.000665_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000665
Chromosome:chromosome 5
Location:1019970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247400 RDP4 Putative rhodanese domain phosphatase; (1 of 25) PF00581 - Rhodanese-like domain (Rhodanese) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGGTACGAAGAACGAGTAAAAGACGGATTGATTCACGCGGGTTTTCG
Internal bar code:ATATGGTAACGTTTGGAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGAACAGGAACTTCCC
Suggested primer 2:AAAGCTTGCTTGCGTGAGTG