Insertion junction: CLIP2.000666_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000666
Chromosome:chromosome 3
Location:2330415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGGTGTTCCGAACCAACCCGAGACTGTACCCTGCACGTATTAACGTT
Internal bar code:GCAACGTGTCCGGCGTGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGATTGGCGTTCAGGA
Suggested primer 2:CCCTTTCAAGAGCCTCCCTG