Insertion junction: CLIP2.000692_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000692
Chromosome:chromosome 5
Location:140737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242350 Putative calcium-transporting ATPase, endoplasmic reticulum-type; (1 of 1) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATAAGAGTTCACAACTTACCAAGGATGGGCAGAGAGTGGTTGGAGGA
Internal bar code:GGGTTACATCAGCGCCGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCAGGAGAGTTGCTGTC
Suggested primer 2:GTCTTATGAGCGAGGGTCGG