Insertion junction: CLIP2.000692_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000692
Chromosome:chromosome 5
Location:140743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242350 Putative calcium-transporting ATPase, endoplasmic reticulum-type; (1 of 1) PTHR24093:SF289 - CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACCGGGTTTGGAAGGGTGCCCAAACCTTCAAACACTACCCAACCACC
Internal bar code:GGGTTACATCAGCGCCGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTATGAGCGAGGGTCGG
Suggested primer 2:ATGCCAGGAGAGTTGCTGTC