Insertion junction: CLIP2.000694_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000694
Chromosome:chromosome 1
Location:2833332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTTCCTGCCGTTCACGTGCCCGCTGCTTCTCACTCTCCTTGCAATAC
Internal bar code:GAGCTAGTCTAGAGTCAGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:222
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:222

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATAGAGCTTGCGTCCGA
Suggested primer 2:AAGGGTTTGCTTGGGTGTCA