Insertion junction: CLIP2.000710_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000710
Chromosome:chromosome 1
Location:1721228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009500 CDPK3,CDPK5 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGCTCTGGCGCTAAGGCCCGTCGTGTTGGGGATGGGTGGGAGCTAG
Internal bar code:CGCTTCGGAGGATAATTTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTATGTCGCGAATGGAG
Suggested primer 2:CCCTCAATGTCCTGGGCAAT