Insertion junction: CLIP2.000713_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000713
Chromosome:chromosome 6
Location:2478050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269050 TIC62,YCF39-2 (1 of 2) PTHR14194:SF71 - PRESTALK A DIFFERENTIATION PROTEIN A; Putative dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCAAAGACAGCGTCACATGACACGGCGCGACACGCCGTGCAAAAC
Internal bar code:TGCGTAAGCTCGATTATTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1764
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGAGTGGCTGGACATC
Suggested primer 2:TACACACACAGAACCCCAGC