Insertion junction: CLIP2.000716_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000716
Chromosome:chromosome 9
Location:2611530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392250 OTU5 (1 of 2) IPR000104//IPR003323 - Antifreeze protein, type I // OTU domain; OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTGCAATGGATGGCTCAAGCTGGGGGGTGGGGTGGGGTTGGAGTGT
Internal bar code:CTTAAGTTTAAAATGTAAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:646
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGGAGAGCTTCTTGAA
Suggested primer 2:TCGTTCGAGTGTTTCCTGGG