Insertion junction: CLIP2.000716_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000716
Chromosome:chromosome 17
Location:1365734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTAGAGAATCTATAGAAACCTTACCCGAAATGTGCGCAGGAGAGGAAA
Internal bar code:AAGTACCTCTATTAGTTATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGCCGTGAACTCCTCT
Suggested primer 2:TCCCACGTCTACACAGTTGC