Insertion junction: CLIP2.000739_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000739
Chromosome:chromosome 5
Location:3139200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755997 PHC18,FAP150 Pherophorin-like Flagellar Associated Protein 150; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCCTAAGCCTCCCTCGCCGCCTCCCCCCTCGCCTCCTCCCACTTGCG
Internal bar code:GTCCGTTAATTTATAGCCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2223
LEAP-Seq percent confirming:79.3103
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGTAGTCGTTTGCGCT
Suggested primer 2:GCCAAACCAGCCTGCTACTA