Insertion junction: CLIP2.000741_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000741
Chromosome:chromosome 12
Location:1770980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485850 CPLD64 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF06916 - Protein of unknown function (DUF1279) (DUF1279) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGACTCACACCTCTCGACTCTTCCTCTCACAATCAAGCGCTCATACC
Internal bar code:ACATGCAATTGCAATTATGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAGGTGTATGTGCAGC
Suggested primer 2:GTGTCAGGTTTGCACAGCTG