Insertion junction: CLIP2.000741_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000741
Chromosome:chromosome 12
Location:1770991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485850 CPLD64 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF06916 - Protein of unknown function (DUF1279) (DUF1279) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACAACGCGTAAGAGAGCAGTCTTGTGGTCTTAAGTACAACGTGGTTT
Internal bar code:ATAACCCGGAGACCTACCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAGGTTTGCACAGCTG
Suggested primer 2:ACCTGAGGTGTATGTGCAGC