Insertion junction: CLIP2.000746_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000746
Chromosome:chromosome 6
Location:1622623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261750 BES3,RBMP1 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); RuBisCO binding membrane protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGTATCATACGCCAGCTGAGCCAGCCCATGGGTGTGGTGCTCGCCTG
Internal bar code:ATAGAAAGAGTTATGAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGCCTCCCCAGATCTT
Suggested primer 2:CGCTGTTGGCATGGCTATTC