Insertion junction: CLIP2.000755_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000755
Chromosome:chromosome 9
Location:3529696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396438 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACATGAGCGAGCGTGTACTTTTGCTGTCGCTGATGGCAATCCTGCCTC
Internal bar code:CTAGGAATTATTCGGGCTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAGCTGATGAGAAGTGG
Suggested primer 2:TGTCGTTTTGCTGTTCGCTG