Insertion junction: CLIP2.000756_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000756
Chromosome:chromosome 9
Location:5425561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408464 (1 of 1) PF10637 - Oxoglutarate and iron-dependent oxygenase degradation C-term (Ofd1_CTDD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACATACGGGAACACACACGTCGCCGCAAAGATTGCTTGCATGCATACG
Internal bar code:ACTCTACCGAGACTCCGGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1858
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCCATACTCTGCAGCA
Suggested primer 2:AGGGTAGGAGGTAGCAGGTG