Insertion junction: CLIP2.000756_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000756
Chromosome:chromosome 9
Location:5425561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408464 (1 of 1) PF10637 - Oxoglutarate and iron-dependent oxygenase degradation C-term (Ofd1_CTDD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATACCCACCACAGTCAAACCCCAACGCCCCCCGTTCAATCACACTCCT
Internal bar code:ACAGACGATATTGCTTTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:71.0526
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTAGGAGGTAGCAGGTG
Suggested primer 2:GCCTTCCATACTCTGCAGCA