Insertion junction: CLIP2.000760_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000760
Chromosome:chromosome 8
Location:2596937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373100 CYP97C3,CYP25 Cytochrome P450, CYP97 superfamily; (1 of 1) 1.14.99.45 - Carotene epsilon-monooxygenase / LUT1 outside_mRNA
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTGAGATGCATGCGTACAGCAATTGTGCGTGACGCAATTGAGCTGG
Internal bar code:ACAATCAAGTTCGTGTTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1909
LEAP-Seq percent confirming:97.0149
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGAGTACGACCATCGC
Suggested primer 2:CTCATATCCTCGCCTGCAGG