Insertion junction: CLIP2.000767_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000767
Chromosome:chromosome 2
Location:3311625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097800 HLA3,MRP1 (1 of 18) 3.6.3.44 - Xenobiotic-transporting ATPase / Steroid-transporting ATPase; Bicarbonate ABC transporter 5'UTR
lncRNA_TCONS_00041697 5'UTR
lncRNA_TCONS_00041698 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAAGAACGCCAAAGGCAAGCATGTATCAATTTGACCCGCACTGCTCT
Internal bar code:GTTGCACTTGAGGACGAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:8459
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTCACTCAACAAGTCT
Suggested primer 2:CAGTCGTGGTGTCGGTGTAA