Insertion junction: CLIP2.000769_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000769
Chromosome:chromosome 7
Location:3336034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334900 (1 of 3) IPR004089 - Methyl-accepting chemotaxis protein (MCP) signalling domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGGCACTACCAGGTCGTTGTAGAGCTTGGGCCCCAGCACGAAGAACA
Internal bar code:TTAGGCGGCATACTACTTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGAGGTGAAGGCTAGG
Suggested primer 2:TGTTTGGAACACCTGCCTGT