Insertion junction: CLIP2.000786_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000786
Chromosome:chromosome 12
Location:7060360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560250 (1 of 5) PF04884 - Vitamin B6 photo-protection and homoeostasis (DUF647) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAGGGCGCGTGGGTGGGTGCACGGCAACAGGTCGGTTTGGGGCAAC
Internal bar code:GCGGTAGTAACCGGACTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2569
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTGCGAGTGTTGTGGG
Suggested primer 2:GGTGGGTCTTGGATCCTTGG