Insertion junction: CLIP2.000787_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000787
Chromosome:chromosome 3
Location:5897754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGATCCCTCGCCCCACGCTCCTCCCGCCAACGCCCCGCTCCTCCCTAC
Internal bar code:CTTCCGGACTGGGCATTATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGCATGGAAGCGACAGA
Suggested primer 2:GCTTTCAATCGCGTGACCTC