Insertion junction: CLIP2.000788_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000788
Chromosome:chromosome 1
Location:3083256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019550 ankryin repeat containing protein; (1 of 2) PTHR24128:SF17 - E3 UBIQUITIN-PROTEIN LIGASE XBAT32 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTTCCGAGTTGCGGCGACATGCTATTCTCAATGCCAGGTCCATGCA
Internal bar code:TGTATATCGGGTCGCTACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4092
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAGCACTCACTTGCAC
Suggested primer 2:GCGGACCTAGACTTTTGGCT