Insertion junction: CLIP2.000794_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000794
Chromosome:chromosome 8
Location:2753585
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g373450 SBE4 (1 of 1) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase; Starch Branching Enzyme 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTCGTGGCCTCCCTGTGTTTTTGCGGTTGGCGGGGTCGGTAGCGGT
Internal bar code:TGACCCACGACGCTTGTGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGAGCAGAGAGGAGAA
Suggested primer 2:GAGTGCAGGGAACTTACGCT