Insertion junction: CLIP2.000797_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000797
Chromosome:chromosome 3
Location:5735731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187150 (1 of 1) IPR001623//IPR027986//IPR027989//IPR028031 - DnaJ domain // T-cell activation inhibitor, mitochondrial // Domain of unknown function DUF4461 // Domain of unknown function DUF4460 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTATTACCATAACCCTTGTATGATTATACCCATATTGTTTGAGTGTT
Internal bar code:TGGTGCCTGGGGGTATTCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2574
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGGAGCTGAGCTGTCA
Suggested primer 2:TGTGACGTCCTGAAGCTCAC