Insertion junction: CLIP2.000800_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000800
Chromosome:chromosome 16
Location:7761930
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687294 FTRV1,FTRV Ferredoxin Thioredoxin reductase, variable subunit%252C chloroplastic; (1 of 1) PTHR10949//PTHR10949:SF11 - LIPOYL SYNTHASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTTCGGCGCATGGAAGACCTTAACGGAAGCGATCACCTTGACCTTC
Internal bar code:AAACTATCATTTAGTATATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3711
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCGTAGTCCATCAACAC
Suggested primer 2:CCACAACTCACGAGTCACGA