Insertion junction: CLIP2.000810_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000810
Chromosome:chromosome 13
Location:3850067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589450 FBB6L1 (1 of 1) IPR002035//IPR013694 - von Willebrand factor, type A // VIT domain; FBB6 like protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCCGCTTGAGCGGCACCGGGATCGGCTTCTCACCGCCCTCGACGAAC
Internal bar code:GCCGTCGAGGTCACTTGGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAACGTTCTCGCACACGG
Suggested primer 2:GGAGAGGACGTAGGTCACCT