Insertion junction: CLIP2.000810_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000810
Chromosome:chromosome 16
Location:416967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693500 FAP40,ISG1,ISG-C1 Hydroxyproline-rich Flagellar Associated Protein 40; (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGGGGCTCAACATCGTGAGATCGGAGGGCTCTGGCGGCTAGGCGGT
Internal bar code:AGGGCAAGTCAGAGGTGTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTAACAGTGAGTGGCCA
Suggested primer 2:CTTGCAGGCCACACAAGAAC