Insertion junction: CLIP2.000810_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000810
Chromosome:chromosome 16
Location:416971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693500 FAP40,ISG1,ISG-C1 Hydroxyproline-rich Flagellar Associated Protein 40; (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTATTTGCCCCCTCCCATCCATCGAGTGCCGTAATCTGTTGGAGCAC
Internal bar code:TGCATGCGGTAAGATAGCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAGGCCACACAAGAAC
Suggested primer 2:CTGCTAACAGTGAGTGGCCA