Insertion junction: CLIP2.000812_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000812
Chromosome:chromosome 16
Location:3256974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666050 CPLD49,SCD1 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP); Cytochrome b6f biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTCAAAAGGCCGCATAGCCGCCGGCGCCCCCCGCCGCTCTGCTGCTG
Internal bar code:TTCGTGGTGACGGAGATTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:98.9691
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTGCCTAGTGTCCGCTC
Suggested primer 2:GCCGCAGTGCATGTGATATG