Insertion junction: CLIP2.000820_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000820
Chromosome:chromosome 12
Location:5668434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531900 FLVA,FLVA1 (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAGGGCGATGCCATGGTGTTGACAAGTCATTGAGCCAGCTAAAAACA
Internal bar code:TATTTTGAAGTGTGCCAGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:773
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGATCGTAAAGGCGAGGG
Suggested primer 2:TGATCCTACTGTCCGCCTCA