Insertion junction: CLIP2.000821_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000821
Chromosome:chromosome 4
Location:1433576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214200 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGATCGGAGCAGCAGGCGGGTGCCGCTGGCAGCGCTTGCTTTTGCGCG
Internal bar code:TATGTTTCGCGGAGCAGAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAGGCCAGAGACTCCTG
Suggested primer 2:TACATTCGGTGCGTGTGTGA