Insertion junction: CLIP2.000827_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000827
Chromosome:chromosome 10
Location:5866793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGCTTGGGCGGTTCTGGCGATGCAAGAATGTGCCAACATTCTTGTTG
Internal bar code:ACCTTTACATATTATAATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTCTCCCTTCCGAAA
Suggested primer 2:CTAGGAGAATCTGCGGCAGG