Insertion junction: CLIP2.000831_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000831
Chromosome:chromosome 4
Location:2614596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222800 LCID,LCID1 Low-CO2 inducible protein D 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCCCCGCCGGCCTCTCCTCAATGTATGGTTTTGCCGTCTGGGCTGC
Internal bar code:GGTCAGGGGCAAAAAATGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1010
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCATAGTGAGTCAAAGC
Suggested primer 2:GCACCACCAGCTTCTTTTGG