Insertion junction: CLIP2.000835_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000835
Chromosome:chromosome 17
Location:1366112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGGATAGAATGACGGGCGGCACTAGTCATGAAACGATACGGTAGCA
Internal bar code:ACTTCGGATTGGAGGTTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGCCGTGAACTCCTCT
Suggested primer 2:GCTACGGGCGTTAGTCCTAC