Insertion junction: CLIP2.000838_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000838
Chromosome:chromosome 3
Location:7350272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206600 AAD1 Acetohydroxyacid dehydratase; (1 of 1) 4.2.1.9 - Dihydroxy-acid dehydratase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCTGCCTAAACACTGTTCCATCGCACACCCATACCGGCATACCCTG
Internal bar code:GAAGCCGGCTGTCTCGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TATCAGAAGGGACAGGCGGA
Suggested primer 2:CATTTGGCTTGACCCAGCAC