Insertion junction: CLIP2.000843_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000843
Chromosome:chromosome 16
Location:1919461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655950 TRP2 Transient receptor potential ion channel protein; (1 of 3) IPR002110//IPR005821//IPR020683 - Ankyrin repeat // Ion transport domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGGTGGGTGCGCGCAGCACTGGTTCAAGGGCGCAGGGCTCGTGCAC
Internal bar code:TGGTTACAGTACTCAAGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:767
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCTTGTCGCGTATGTC
Suggested primer 2:CCATGACGGACTCTATGGGC