Insertion junction: CLIP2.000844_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000844
Chromosome:chromosome 16
Location:1916450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655950 TRP2 Transient receptor potential ion channel protein; (1 of 3) IPR002110//IPR005821//IPR020683 - Ankyrin repeat // Ion transport domain // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATTGTGTGTGTAGGTGCTGTGTGCATGGGCCAATTTCGATGGTCCGT
Internal bar code:TGTTATATGTATGCAATGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCAGGTAGGCATAGGCT
Suggested primer 2:CGTGACGGGGATATCCACAG