Insertion junction: CLIP2.000847_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000847
Chromosome:chromosome 9
Location:3188497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394510 (1 of 1) IPR002044//IPR010989//IPR013784 - Carbohydrate binding module family 20 // t-SNARE // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCCAACAAATAGGGTTCACGCGGTCTGCCTGCCCTCGCCCAGCTTCC
Internal bar code:CAGGATGTCGGCTATTGAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCTCATGGCCCCTGAA
Suggested primer 2:TTTGGTCACTTCTCGAGGGC