Insertion junction: CLIP2.000851_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000851
Chromosome:chromosome 6
Location:1626174
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g261750 BES3,RBMP1 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); RuBisCO binding membrane protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATCCCTGCCCTGCACCCGCGCCTCACCCGAACGGCTCCTCGATGCTG
Internal bar code:GTAGTTGTGTCGGGAGGTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTCGAAGGGTTGGAAG
Suggested primer 2:CTTGGTCAGCTTGGAGGAGG