Insertion junction: CLIP2.000857_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000857
Chromosome:chromosome 2
Location:6192379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGCTTCAGGCCCACGGCCGCGTGTGCGTGTCACCGTCGGTGAGCGG
Internal bar code:AAGGATTAAAGCGGCACTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGTCTCGGATTGGTCGC
Suggested primer 2:GCTGAATCGCTGGCTGATTG