Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | + |
Strain: | CLIP2.000866 |
Chromosome: | chromosome 16 |
Location: | 2432123 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre16.g659950 | PRPS5 | Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) | 3'UTR |
Cre16.g660000 | CMT1A,CPLD63 | (1 of 2) PTHR12608:SF7 - GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn transport into chloroplast | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GTGACAGCGCTGGTCAGGCATGGCTAGCTGCCAGGCAGATACAGCCCGGT |
Internal bar code: | GTTACACAGATGCGGAGTTTCG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1633 |
LEAP-Seq percent confirming: | 100.0 |
LEAP-Seq n confirming: | 103 |
LEAP-Seq n nonconfirming: | 0 |
LEAP-Seq n unique pos: | 103 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | CATTATCGTGCGCATGTGCA |
Suggested primer 2: | TTGACGGAATGCGTTGGGTA |