Insertion junction: CLIP2.000867_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000867
Chromosome:chromosome 10
Location:2232418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433750 PAP1 Class-I Nucleotidyl-transferase 1, nuclear; (1 of 1) K14376 - poly(A) polymerase (PAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGTGTCGCTGGGTTGTCTATGCTTATGCGTGGCGTTACGCATTTTGC
Internal bar code:TTGGAGACCCGTGTTATTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1578
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAAGAGCAATCCAGCGC
Suggested primer 2:GCAAATGCGAGAGAGGAGGA