Insertion junction: CLIP2.000870_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000870
Chromosome:chromosome 12
Location:1849856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512300 (1 of 1) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAGCCCCAACCACCCCCACGCAGCATCCCCAAGCACAGTGCTGCTG
Internal bar code:AATAGGTATAAGGGACACCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1843
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATGCAATGACGTCGCCC
Suggested primer 2:ACCCATACCTGGTGGATGGA