Insertion junction: CLIP2.000872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000872
Chromosome:chromosome 3
Location:8370685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198850 TL19 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Thylakoid llumen protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCATCACGGTGTCCAACGGCAAGGTGTTCTCGCTGTTCGTGCGCAGC
Internal bar code:GAAGCAATTTGCGAAGACAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1382
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCCAACGCTTAAACA
Suggested primer 2:ACCTATCTCCCACCACCTCC