Insertion junction: CLIP2.000876_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000876
Chromosome:chromosome 3
Location:5896987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTCTACCTTTCCAGCGACTGCCTCCCCAGCTACCGCCACCCCAGCTA
Internal bar code:ACCTCGGGTGGGGCCCTTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3905
LEAP-Seq percent confirming:49.4845
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCGCTTCCATGCCTTT
Suggested primer 2:AGATCTTTTGGAGCTGGGCC