Insertion junction: CLIP2.000880_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000880
Chromosome:chromosome 2
Location:6184327
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g120150 RBCS2 (1 of 2) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS); Ribulose-1%252C5-bisphosphate carboxylase/oxygenase small subunit 2, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCAGCGTGCTTGCAGATTTGACTTGCAACGCCCGCATTGTGTCGACG
Internal bar code:CATTAACACATTGTTAGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTTTCCGTGCTGAAGC
Suggested primer 2:CAAAGTGACTATCGTGCGCG