Insertion junction: CLIP2.000880_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000880
Chromosome:chromosome 10
Location:4693872
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g452200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTTTGGCGGCTGGGTCCTCGGATGGCCGCGCTGCTGTGTACCT
Internal bar code:CGGAAATTAAACTAGGTGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAACGTCGGACTCTTT
Suggested primer 2:CCCCTCCCTTCATCCCCTAA