Insertion junction: CLIP2.000888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000888
Chromosome:chromosome 14
Location:3870866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632650 (1 of 4) IPR000719//IPR001229//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTTATCAAGCTTCCGCGGTTCAAATTTGGAGTACCACACGGAGCTAC
Internal bar code:CGGACAACCTACCCGTACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3570
LEAP-Seq percent confirming:73.2558
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATCCCACTCCACCTT
Suggested primer 2:ACCTGAAGCAATGAGGCTCC